Issues

• Error when running vk phylo tree nj

  AndersenLab/VCF-kit#53 · Filter by author maria-sat opened on Aug 8, 2025
  1

• Can't search/download GRCh37 genome

  AndersenLab/VCF-kit#49 · Filter by author zuber-bioinfo opened on Dec 28, 2024

• Can't install

  AndersenLab/VCF-kit#48 · Filter by author boutrys opened on May 10, 2024

• vcf2tsv cna't print header

  AndersenLab/VCF-kit#47 · Filter by author huipan1973 opened on Mar 27, 2024

• problem with primer3 in both conda and docker

  AndersenLab/VCF-kit#46 · Filter by author shanmugavadivelps opened on Feb 19, 2024

• Running Docker version: "ModuleNotFoundError: No module named 'pomegranate'"

  AndersenLab/VCF-kit#45 · Filter by author ariellerjohnson opened on Nov 16, 2022

• Cannot find thermo path '/primer3_config/

  AndersenLab/VCF-kit#44 · Filter by author thomvesiri opened on Oct 3, 2022

• Memory Issues when running tajima module

  AndersenLab/VCF-kit#42 · Filter by author mwersebe opened on Apr 4, 2022

• Custom genome assembly?

  AndersenLab/VCF-kit#41 · Filter by author BayLab opened on Mar 12, 2022

• TypeError: '<' not supported between instances of 'int' and 'NoneType'

  AndersenLab/VCF-kit#40 · Filter by author selasphoruskershaw opened on Jun 10, 2021
  1

• error while using docker image (andersenlab/vcf-kit:20200822175018b7b60d: TypeError: a bytes-like object is required, not 'str'

  AndersenLab/VCF-kit#39 · Filter by author laura-bankers opened on Jun 7, 2021
  1

• Warning --sample option not given

  AndersenLab/VCF-kit#38 · Filter by author VivekTodur opened on May 25, 2021

• cannot get this to work

  AndersenLab/VCF-kit#34 · Filter by author herber4 opened on Jan 6, 2021
  5

• error loading tabix index for building a region specific tree

  AndersenLab/VCF-kit#31 · Filter by author ccastane9 opened on Dec 9, 2020
  2

• TypeError Python 3

  AndersenLab/VCF-kit#30 · Filter by author sofsta opened on Sep 18, 2020
  2

• calculate Tajima'D on haploid

  AndersenLab/VCF-kit#28 · Filter by author AlexWanghaoming opened on Jul 29, 2020
  2

• Conda install error

  AndersenLab/VCF-kit#25 · Filter by author danrlu opened on Apr 2, 2020

• The 'VCF-kit==0.1.6' distribution was not found and is required by the application

  AndersenLab/VCF-kit#21 · Filter by author DallasThomas opened on Mar 12, 2019
  2

• problems with PyFPE

  AndersenLab/VCF-kit#13 · Filter by author lroma84 opened on Nov 24, 2017
  2