Issues

• Need to reprocess RLRanges / RLSeq HTML and reupload

  bug
  Bishop-Laboratory/RLBase-data#22 · Filter by author millerh1 opened on Jul 1, 2022

• Workaround for plant genomes

  enhancement
  Bishop-Laboratory/RLBase-data#21 · Filter by author millerh1 opened on Dec 28, 2021

• Keep summit information when creating rl regions

  v1
  Bishop-Laboratory/RLBase-data#18 · Filter by author millerh1 opened on Oct 19, 2021

• Need to modify genome browser session such that "Mean" is used

  Bishop-Laboratory/RLBase-data#17 · Filter by author millerh1 opened on Oct 13, 2021

• Need to obtain coverage tracks with library size normalization

  v1
  Bishop-Laboratory/RLBase-data#16 · Filter by author millerh1 opened on Oct 12, 2021

• Mistake in data entry of Tissue for HT1080 cell lines

  v1
  Bishop-Laboratory/RLBase-data#15 · Filter by author millerh1 opened on Oct 12, 2021

• Need also to find variable R-loop regions (should allow as low as 5% region cutoff)

  analysis neededv2
  Bishop-Laboratory/RLBase-data#14 · Filter by author millerh1 opened on Oct 8, 2021
  1

• Add in new data (Late 2021 update)

  Bishop-Laboratory/RLBase-data#13 · Filter by author millerh1 opened on Oct 3, 2021
  1

• num_total_peaks and num_tested_peaks are backwards in feat_enrich_samples

  Bishop-Laboratory/RLBase-data#10 · Filter by author millerh1 opened on Sep 30, 2021

• Need to add in the RLBPs scripts (remove from .gitignore)

  Bishop-Laboratory/RLBase-data#9 · Filter by author millerh1 opened on Sep 30, 2021
  1

• Need intergenic regions in Transcript_Features database

  Bishop-Laboratory/RLBase-data#8 · Filter by author millerh1 opened on Sep 30, 2021

• DBs to remove

  Bishop-Laboratory/RLBase-data#6 · Filter by author millerh1 opened on Sep 19, 2021

• Need to refine RLoop table analysis to be more permissive

  Bishop-Laboratory/RLBase-data#20 · Filter by author millerh1 opened on Jul 28, 2021

• Need to refine peaks on the RLoop table analysis by strand

  Bishop-Laboratory/RLBase-data#19 · Filter by author millerh1 opened on Jul 28, 2021