Issues

• Overwriting output blocks indefinitely by default in non-interactive mode (e.g. sbatch)

  UCSC-LoweLab/tRNAscan-SE#48 · Filter by author ShanelKalicharan opened on Aug 15, 2026

• compile fails with newer gcc 15

  UCSC-LoweLab/tRNAscan-SE#47 · Filter by author cryptogenomicon opened on Jul 1, 2026
  1

• return bed file from EukHighConfidenceFilter

  UCSC-LoweLab/tRNAscan-SE#44 · Filter by author francesco227 opened on Jul 24, 2025
  1

• Negative tRNA coordinate values

  UCSC-LoweLab/tRNAscan-SE#38 · Filter by author ohickl opened on Jun 1, 2024
  3

• support for piping from stdin and/or for gzip-compressed input files

  UCSC-LoweLab/tRNAscan-SE#36 · Filter by author jvollme opened on Apr 24, 2024
  1

• Parallel compile error

  UCSC-LoweLab/tRNAscan-SE#27 · Filter by author sjaenick opened on Jul 15, 2023

• [Feature Request] tRNA model for giant viruses

  UCSC-LoweLab/tRNAscan-SE#26 · Filter by author jolespin opened on Jul 7, 2023

• [Feature request] tRNA model for microeukaryotic/protist mitochondria

  UCSC-LoweLab/tRNAscan-SE#24 · Filter by author jolespin opened on Jun 22, 2023
  3

• output file format: minus strand entries, extra spaces, header

  UCSC-LoweLab/tRNAscan-SE#19 · Filter by author darked89 opened on Mar 17, 2023
  1

• set "tRNAscan-SE.conf" to standard unix directory /etc

  UCSC-LoweLab/tRNAscan-SE#18 · Filter by author kbipinkumar opened on Feb 9, 2023
  3