diff --git a/src/common_access_model/schema/common_access_model.yaml b/src/common_access_model/schema/common_access_model.yaml index dd7fc536..46cbd17c 100644 --- a/src/common_access_model/schema/common_access_model.yaml +++ b/src/common_access_model/schema/common_access_model.yaml @@ -55,7 +55,7 @@ imports: - enums/EnumResearchDomain - enums/EnumSampleCollectionMethod - enums/EnumSex -- enums/EnumSite +- enums/EnumSiteExamples - enums/EnumSpatialQualifiers - enums/EnumStudyDesign - enums/EnumSubjectType @@ -1069,7 +1069,7 @@ slots: range: Concept any_of: - range: Concept - - range: EnumSite + - range: EnumSiteExamples spatial_qualifier: title: Spatial Qualifier description: Qualifier that further refine the specific location of diff --git a/src/common_access_model/schema/enums/EnumSite.yaml b/src/common_access_model/schema/enums/EnumSite.yaml deleted file mode 100644 index 75043f4d..00000000 --- a/src/common_access_model/schema/enums/EnumSite.yaml +++ /dev/null @@ -1,14 +0,0 @@ ---- -id: https://includedcc.org/common-access-model/EnumSite -name: EnumSite -enums: - EnumSite: - description: The location of the specimen collection. - reachable_from: - source_ontology: bioregistry:snomedct - source_nodes: - - snomedct:442083009 - include_self: false - is_direct: false - relationship_types: - - rdfs:subClassOf diff --git a/src/common_access_model/schema/enums/EnumSiteExamples.yaml b/src/common_access_model/schema/enums/EnumSiteExamples.yaml new file mode 100644 index 00000000..21585750 --- /dev/null +++ b/src/common_access_model/schema/enums/EnumSiteExamples.yaml @@ -0,0 +1,16 @@ +--- +id: https://includedcc.org/common-access-model/EnumSiteExamples +name: EnumSiteExamples +enums: + EnumSiteExamples: + description: Example locations of specimen collection. Full list of options can be found below snomedct:442083009 . + permissible_values: + snomedct:78277001: + title: Temporal lobe structure + meaning: snomedct:78277001 + snomedct:5798000: + title: Diaphragm structure + meaning: snomedct:5798000 + snomedct:71341001: + title: Bone structure of femur + meaning: snomedct:71341001