feat: integrate Helix-only graph runtime#1993
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Forward-port the Helix implementation onto v8 with native immutable snapshots, atomic generations, rollback, durable state, locking, incremental updates, exports, MCP, global graphs, and query operations. Ported-from: HelixDB/graphify@3cf658f242a18d19c64dc96c54f61ff833d4516a Co-authored-by: George Curtis <george@macbookpro.home> Co-authored-by: xav-db <xav@helix-db.com>
Preserve the upstream README structure while updating obsolete storage, NetworkX, command, and Windows guidance. Regenerate every host skill against the native graph.helix contract.
Port the v8 suite to native storage, add generation/concurrency/state regressions, commit isolated NetworkX parity and raw benchmark results, and enforce the Linux/macOS CI, quality, security, package, and benchmark gates.
Move reverse impact traversal into Helix, eliminate topology rewrites for analysis-only operations, revision durable state by category, and reuse native snapshots through rebuild, search, clustering, global, and presentation workflows. Add atomic rollback and large chunked-state regressions.
Record the full macOS 5k/15k and 20k/60k comparison after the native-state optimization and update the qualification tables. All 18 release gates pass.
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Summary
graph.jsongraph runtime with embedded Helix generationsgraphify-out/graph.helixCompatibility
Existing
graph.jsonfiles are deliberately ignored and produce a concise rebuild-from-source warning. Older Helix schemas are rejected with the same rebuild instruction; production readers never deserialize an old graph into Python to migrate it.Validation
git diff --checkpass in a fresh Python 3.12 environmentbenchmarks/; all 18 gates passed in the recorded runFollow-up CI verification
The final full macOS test invocation in this local environment terminates around 23% without a Python failure report. This draft intentionally leaves CI as the authority for the final full matrix before review/merge.