fix: refresh rxiv-maker citation authors

[paxcalpt]

Summary

• add Rita Carlota and Iván Hidalgo-Cenalmor to the canonical Rxiv-Maker citation
• refresh old injected citations on rebuild
• bump version to 1.22.2 and update bundled citation references

Verification

• uv run --with pytest pytest tests/integration/test_citation_injection.py -q
• uv run --with ruff ruff check src/rxiv_maker/utils/citation_utils.py tests/integration/test_citation_injection.py
• uv build

[github-actions]

🔗 Link Check Failed

Some links in the documentation are broken:

Summary

Status	Count
🔍 Total	146
🔗 Unique	79
✅ Successful	133
⏳ Timeouts	0
🔀 Redirected	5
👻 Excluded	11
❓ Unknown	0
🚫 Errors	2
⛔ Unsupported	0

Errors per input

Errors in README.md

• [404] https://github.com/HenriquesLab/rxiv-maker/stargazers (at 3:1) | Rejected status code: 404 Not Found

Errors in tests/visual/README.md

• [ERROR] error: (at 47:3) | Empty URL found but a URL must not be empty

Redirects per input

Redirects in CODE_OF_CONDUCT.md

• https://www.contributor-covenant.org/faq --[301]--> https://www.contributor-covenant.org/faq/
• https://www.contributor-covenant.org/version/2/1/code_of_conduct.html --[301]--> https://www.contributor-covenant.org/version/2/1/code_of_conduct/

Redirects in docs/google_colab.md

• https://githubtocolab.com/HenriquesLab/rxiv-maker/blob/main/notebooks/rxiv_maker_colab.ipynb --[302]--> https://colab.research.google.com/github/HenriquesLab/rxiv-maker/blob/main/notebooks/rxiv_maker_colab.ipynb

Redirects in README.md

• https://doi.org/10.48550/arXiv.2508.00836 --[302]--> https://arxiv.org/abs/2508.00836
• https://github.com/HenriquesLab/rxiv-maker/issues/new?template=publication_submission.yml --[302]--> https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FHenriquesLab%2Frxiv-maker%2Fissues%2Fnew%3Ftemplate%3Dpublication_submission.yml

Full Github Actions output

---

💡 Tip: Check the full report artifact for details.

[github-actions]

🔗 Link Check Failed

Some links in the documentation are broken:

Summary

Status	Count
🔍 Total	146
🔗 Unique	79
✅ Successful	133
⏳ Timeouts	0
🔀 Redirected	5
👻 Excluded	11
❓ Unknown	0
🚫 Errors	2
⛔ Unsupported	0

Errors per input

Errors in README.md

• [404] https://github.com/HenriquesLab/rxiv-maker/stargazers (at 3:1) | Rejected status code: 404 Not Found

Errors in tests/visual/README.md

• [ERROR] error: (at 47:3) | Empty URL found but a URL must not be empty

Redirects per input

Redirects in CODE_OF_CONDUCT.md

• https://www.contributor-covenant.org/faq --[301]--> https://www.contributor-covenant.org/faq/
• https://www.contributor-covenant.org/version/2/1/code_of_conduct.html --[301]--> https://www.contributor-covenant.org/version/2/1/code_of_conduct/

Redirects in docs/google_colab.md

• https://githubtocolab.com/HenriquesLab/rxiv-maker/blob/main/notebooks/rxiv_maker_colab.ipynb --[302]--> https://colab.research.google.com/github/HenriquesLab/rxiv-maker/blob/main/notebooks/rxiv_maker_colab.ipynb

Redirects in README.md

• https://doi.org/10.48550/arXiv.2508.00836 --[302]--> https://arxiv.org/abs/2508.00836
• https://github.com/HenriquesLab/rxiv-maker/issues/new?template=publication_submission.yml --[302]--> https://github.com/login?return_to=https%3A%2F%2Fgithub.com%2FHenriquesLab%2Frxiv-maker%2Fissues%2Fnew%3Ftemplate%3Dpublication_submission.yml

Full Github Actions output

---

💡 Tip: Check the full report artifact for details.

[github-actions]

Code Review

Reviewed the diff for #314 (author refresh for the canonical Rxiv-Maker citation, v1.22.2).

Overall: small, well-scoped fix. The refresh logic (is_citation_outdated / inject_rxiv_citation in citation_utils.py) correctly detects and replaces stale citations, and this pattern is consistent with the prior "Jaquemet → Jacquemet" fix in 1.22.1. Test coverage for the new behavior looks solid (test_citation_injection_refreshes_stale_entry plus updated unit tests).

Minor issues

1. Inconsistent LaTeX escaping introduced in README.md (line 86):

   author={Bruno M. Saraiva and Rita Carlota and Ant\'{o}nio D. Brito and Iván Hidalgo-Cenalmor and Guillaume Jacquemet and Ricardo Henriques},
   

   António uses the LaTeX-escaped form (Ant\'{o}nio, pre-existing style in this file) but the newly added Iván uses a plain Unicode á. MANUSCRIPT/03_REFERENCES.bib is consistent (Iv\'{a}n), so this is a one-line drift in the README only. Cosmetic since it's a Markdown snippet rather than compiled LaTeX, but worth fixing for consistency — Iv\'{a}n.

2. Three independently-maintained copies of the author string (citation_utils.py, README.md, MANUSCRIPT/03_REFERENCES.bib) with no test tying them together. This PR (and the fact that issue Add Claude Code GitHub Workflow #1 above slipped through) shows how easy it is for these to drift. Not a blocker, but a test asserting README.md's citation matches CANONICAL_RXIV_CITATION (modulo LaTeX escaping) would catch this class of bug going forward.

3. Unrelated .gitignore change (.worktrees/) — harmless, but it's not mentioned in the PR summary and looks like it may be leftover from local tooling rather than part of the citation fix. Worth confirming it's intentional.

Security / performance

No concerns — this is a self-citation string change plus a regex-based find/replace against a local file. No new attack surface (path handling unchanged from prior version, still resolves MANUSCRIPT_PATH under the current working directory as before).

Test coverage

Good — new integration test covers the "refresh stale entry" path end-to-end, and existing unit/integration tests were updated to reflect the new author list including the negative assertion that the old string is gone.