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Merge pull request #723 from dougnukem/fix/backpressure-scales-with-t… fastp ci #235: Commit db121c8 pushed by sfchen
3m 39s master
master
3m 39s
Fix one-gap adapter search offset (#728) and speed up matchWithOneInsertion fastp ci #234: Pull request #729 opened by dougnukem
Action required dougnukem:fix/adapter-gap-search-offset
dougnukem:fix/adapter-gap-search-offset
Action required
ci: thread-count correctness checks (would catch #721) and base-vs-head benchmarks fastp benchmark #4: Pull request #727 synchronize by dougnukem
Action required dougnukem:stack/ci-checks
dougnukem:stack/ci-checks
Action required
ci: thread-count correctness checks (would catch #721) and base-vs-head benchmarks fastp ci #233: Pull request #727 synchronize by dougnukem
Action required dougnukem:stack/ci-checks
dougnukem:stack/ci-checks
Action required
ci: thread-count correctness checks (would catch #721) and base-vs-head benchmarks fastp benchmark #3: Pull request #727 synchronize by dougnukem
Action required dougnukem:stack/ci-checks
dougnukem:stack/ci-checks
Action required
ci: thread-count correctness checks (would catch #721) and base-vs-head benchmarks fastp ci #232: Pull request #727 synchronize by dougnukem
Action required dougnukem:stack/ci-checks
dougnukem:stack/ci-checks
Action required
ci: thread-count correctness checks (would catch #721) and base-vs-head benchmarks fastp benchmark #2: Pull request #727 synchronize by dougnukem
Action required dougnukem:stack/ci-checks
dougnukem:stack/ci-checks
Action required
ci: thread-count correctness checks (would catch #721) and base-vs-head benchmarks fastp ci #231: Pull request #727 synchronize by dougnukem
Action required dougnukem:stack/ci-checks
dougnukem:stack/ci-checks
Action required
ci: thread-count correctness checks (would catch #721) and base-vs-head benchmarks fastp benchmark #1: Pull request #727 opened by dougnukem
Action required dougnukem:stack/ci-checks
dougnukem:stack/ci-checks
Action required
ci: thread-count correctness checks (would catch #721) and base-vs-head benchmarks fastp ci #230: Pull request #727 opened by dougnukem
Action required dougnukem:stack/ci-checks
dougnukem:stack/ci-checks
Action required
fix: bound in-flight memory at high thread counts (stacked on #723) fastp ci #229: Pull request #726 synchronize by dougnukem
2m 49s dougnukem:arch/pack-size-memory-cap-723
dougnukem:arch/pack-size-memory-cap-723
2m 49s
fix: bound in-flight memory at high thread counts (stacked on #723) fastp ci #228: Pull request #726 synchronize by dougnukem
Action required dougnukem:arch/pack-size-memory-cap-723
dougnukem:arch/pack-size-memory-cap-723
Action required
fix: bound in-flight memory at high thread counts (stacked on #723) fastp ci #227: Pull request #726 synchronize by dougnukem
Action required dougnukem:arch/pack-size-memory-cap-723
dougnukem:arch/pack-size-memory-cap-723
Action required
fix: bound in-flight memory at high thread counts (stacked on #723) fastp ci #226: Pull request #726 opened by dougnukem
Action required dougnukem:arch/pack-size-memory-cap-723
dougnukem:arch/pack-size-memory-cap-723
Action required
test: benchmark corpus + historical release backfill (independent of #723) fastp ci #225: Pull request #725 opened by dougnukem
2m 38s dougnukem:benchmark/corpus-and-release-backfill
dougnukem:benchmark/corpus-and-release-backfill
2m 38s
fix: scale reader backpressure with worker thread count (#721) fastp ci #224: Pull request #723 synchronize by dougnukem
3m 5s dougnukem:fix/backpressure-scales-with-threads-721
dougnukem:fix/backpressure-scales-with-threads-721
3m 5s
fix: scale reader backpressure with worker thread count (#721) fastp ci #223: Pull request #723 opened by dougnukem
4d 16h 54m 13s dougnukem:fix/backpressure-scales-with-threads-721
dougnukem:fix/backpressure-scales-with-threads-721
4d 16h 54m 13s
fix: resolve deadlock in paired-end adapter detection with high thread counts (#721) fastp ci #222: Pull request #722 opened by dougnukem
5h 1m 53s dougnukem:fix/pe-adapter-detect-hang-721
dougnukem:fix/pe-adapter-detect-hang-721
5h 1m 53s
set version to 1.3.7 fastp ci #221: Commit 8a2397b pushed by sfchen
3m 31s master
master
3m 31s
Return a nonzero exit status for detected paired-end read-count mismatches fastp ci #220: Pull request #719 opened by thierrygosselin
3m 29s thierrygosselin:fix-paired-read-count-mismatch
thierrygosselin:fix-paired-read-count-mismatch
3m 29s
Return a nonzero exit status for detected FASTQ parsing errors fastp ci #219: Pull request #718 opened by thierrygosselin
Action required thierrygosselin:fix-fastq-parse-error-exit
thierrygosselin:fix-fastq-parse-error-exit
Action required
Reject truncated BGZF blocks instead of treating them as EOF fastp ci #218: Pull request #717 opened by thierrygosselin
-1s thierrygosselin:fix-truncated-bgzf-input
thierrygosselin:fix-truncated-bgzf-input
-1s
Fix undetected buffered output-write failures fastp ci #217: Pull request #716 opened by thierrygosselin
Action required thierrygosselin:fix-buffered-output-errors
thierrygosselin:fix-buffered-output-errors
Action required
Count reads dropped by --dedup as duplicates instead of "passed filter" (#638, #528) fastp ci #216: Pull request #715 opened by cindykrafft
Action required cindykrafft:fix/issue-638-dedup-filter-counts
cindykrafft:fix/issue-638-dedup-filter-counts
Action required
Merge pull request #714 from BenjaminDEMAILLE/makefile-install-mkdir fastp ci #215: Commit dce5c40 pushed by sfchen
3m 11s master
master
3m 11s