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Restructure refinement workflow #2

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Restructure refinement workflow#2

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@SamvPy
SamvPy
opened on Apr 8, 2025

The refinement workflow needs to be restructured to improve usability

  • Spectralis: Make switching modes easier with the nextflow config
  • Edit config setting names to improve interpretability
  • Implement MS2Rescore as NF pipeline

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