An R package for fine-mapping and prioritizing candidate genes from GWA studies.
Ensure remotes package is installed.
install.packages("remotes")Install panvaR:
remotes::install_github("danforthcenter/panvaR", build_vignettes = TRUE)We have also implemented a GUI for visualizing results. To use the GUI run:
library(panvaR)
panvar_shiny()To get started, check out the tutorial vignette here.
PanvaR visualizes specfic QTL by creating information dense plots using a a flexible array of data sources.
Please let us know if there are problems with the package via the github issues page. We are always open to improving the ease of use and functionality so also please inform us of any potential additions or features. Thanks for using our tool!