Issues

• assistant: a late chat reply re-binds the session cookie and locks out the conversation the user switched to

  bug
  galaxyproject/brc-analytics#1811 · Filter by author frano-m opened on Oct 6, 2026
  1

  

• assistant: group useassistantchat's return into state and actions

  galaxyproject/brc-analytics#1810 · Filter by author frano-m opened on Oct 6, 2026
  1

  

• assistant: track the open chat in the history by its saved analysis id, not its live session

  galaxyproject/brc-analytics#1809 · Filter by author frano-m opened on Oct 6, 2026
  2

  

• assistant: workflow drops out of the analysis setup when the reply names it without its iwc id

  bug
  galaxyproject/brc-analytics#1808 · Filter by author frano-m opened on Oct 6, 2026
  

• Do all Python-phase catalog transformations in dbt

  galaxyproject/brc-analytics#1804 · Filter by author hunterckx opened on Oct 5, 2026
  

• Incorporate Ruff linting

  galaxyproject/brc-analytics#1800 · Filter by author hunterckx opened on Oct 5, 2026
  

• assistant-ui: keep keyboard focus when a setup panel chip is cleared

  galaxyproject/brc-analytics#1798 · Filter by author frano-m opened on Oct 5, 2026
  

• assistant-ui: treat gene annotation as optional in the setup panel counter once a workflow is chosen

  galaxyproject/brc-analytics#1797 · Filter by author frano-m opened on Oct 5, 2026
  

• assistant-ui: clear a setup field directly instead of through a chat message

  galaxyproject/brc-analytics#1796 · Filter by author frano-m opened on Oct 5, 2026
  1

  

• (Draft) Gene pages: stub gene detail page

  galaxyproject/brc-analytics#1789 · Filter by author NoopDog opened on Oct 1, 2026
  

• NIAID-BRCs AI Codeathon 2.0 at Argonne (Sept 16–18, 2026)

  galaxyproject/brc-analytics#1786 · Filter by author NoopDog opened on Oct 1, 2026
  

• Address issues in post_ncbi_request

  galaxyproject/brc-analytics#1785 · Filter by author hunterckx opened on Sep 30, 2026
  1

  

• Gene catalog: serving architecture

  galaxyproject/brc-analytics#1783 · Filter by author dannon opened on Sep 30, 2026

• Load organism image input data via dlt

  galaxyproject/brc-analytics#1782 · Filter by author hunterckx opened on Sep 29, 2026
  

• Load necessary external data via dlt

  galaxyproject/brc-analytics#1781 · Filter by author hunterckx opened on Sep 29, 2026
  

• Prototype: build a gene list with synonym identifiers for catalog assemblies (P. falciparum + P. vivax)

  galaxyproject/brc-analytics#1777 · Filter by author NoopDog opened on Sep 29, 2026
  9

• Gene pages: find and view genes across catalog assemblies

  roadmap item
  galaxyproject/brc-analytics#1776 · Filter by author NoopDog opened on Sep 29, 2026

• Assistant: overlapping writes to a shared session silently drop turns (last-write-wins in Redis and the saved row)

  galaxyproject/brc-analytics#1775 · Filter by author dannon opened on Sep 28, 2026

• workflow loader: colliding workflow IDs silently overwrite each other

  galaxyproject/brc-analytics#1772 · Filter by author frano-m opened on Sep 24, 2026
  

• workflow gate: index workflow categories by TRS ID at load time

  galaxyproject/brc-analytics#1771 · Filter by author frano-m opened on Sep 24, 2026
  

• assistant-ui: status indicator treatment (replace emoji?)

  galaxyproject/brc-analytics#1767 · Filter by author frano-m opened on Sep 23, 2026
  

• assistant-ui: loading, error and empty states

  galaxyproject/brc-analytics#1766 · Filter by author frano-m opened on Sep 23, 2026
  

• assistant-ui: surface post-completion CTAs in the chat on mobile

  galaxyproject/brc-analytics#1765 · Filter by author frano-m opened on Sep 23, 2026
  

• assistant-ui: mobile tabbed layout (History / Chat / Setup)

  galaxyproject/brc-analytics#1764 · Filter by author frano-m opened on Sep 23, 2026
  1

  

• assistant-ui: suggested next steps as clickable action rows

  galaxyproject/brc-analytics#1762 · Filter by author frano-m opened on Sep 23, 2026