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@marbl

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  1. marbl/DJCounter marbl/DJCounter Public

    This repository can be used to calculate the number of DJ counts in the genome aligned to the GRCh38 (broad reference).

    Jupyter Notebook 8

  2. marbl/verkko-fillet marbl/verkko-fillet Public

    Post-verkko graph and assembly curation in Python.

    Jupyter Notebook 36 1

  3. marbl/T2T-Browser marbl/T2T-Browser Public

    Genome browser hub for the T2T genomes and resources

    HTML 32 3

  4. arangrhie/T2T-Ref arangrhie/T2T-Ref Public

    Pipelines for using T2T genome as a reference

    Jupyter Notebook 16

  5. marbl/Pooch marbl/Pooch Public

    POOCH is a Snakemake-based pipeline for assigning chromosome labels and determining the parent of origin (maternal or paternal) of near-complete genome assemblies.

    Python 3

  6. marbl/KOLF2.1J-Diploid-Assembly marbl/KOLF2.1J-Diploid-Assembly Public

    The personalized diploid genome of KOLF iPSC cell line