Raise alignment size limits (HyPhyGlobals.ibf) - #148
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Previous caps were very restrictive (maxRELSize=75, maxFEL/SLACSize=500). New values derived from the DM3 timing calculator (timingEstimates.js power-law fits, ~12h budget at 1000 sites on the 32-core backend): maxSLACSize 500 -> 10000 maxFELSize 500 -> 25000 maxMEMESize (=FEL) -> 10000 (un-aliased from maxFELSize) maxPRIMESize (=FEL) -> 5000 (un-aliased; PRIME costlier than FEL) maxFUBARSize 5000 -> 25000 maxRELSize 75 -> 2000 (also lifts aBSREL via maxBSRSize) maxGARDSize 300 -> 500 (small; GARD is superlinear in taxa) maxUploadSize 5000 -> 25000 (global ceiling must be >= per-method caps) maxDMSites (12000) unchanged. Note: these values are bundled into the built client, so a rebuild is required for them to take effect.
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Summary
Raises the alignment size limits in
HyPhyGlobals.ibf. The previous caps were very restrictive —maxRELSize=75,maxFELSize=maxSLACSize=500sequences — and were the practical ceiling on what users could submit in DM3.New values were derived from the DM3 timing calculator (
timingEstimates.jspower-law fits), targeting a ~12h budget at 1000 sites on the 32-core backend.maxDMSites(12000) unchanged.Note: these values are compiled into the built SvelteKit client bundle, so a rebuild (
BUILD_TARGET=node) is required for them to take effect at runtime — editing the source alone does not change the running limits.